16. Exploring C1 substrate cofeeding in Eubacterium limosum with AneVO, a low-cost anaerobic parallel bioreactor system
2025.
KO Hoyt, G Zhou, W Gasparrini, PJ Sliter, AS Khalil, BM Woolston
Preprint on bioRXiv.
15. Development of a transcriptional biosensor for hydrogen sulfide that functions under aerobic and anaerobic conditions
2025. ACS Synthetic Biology. In press.
MT Fernez, S Hegde, JA Hayes, KO Hoyt, RL Carrier, BM Woolston
Preprint on bioRXiv
14. Pathways to sustainability: A quantitative comparison of aerobic and anaerobic C1 bioconversion routes
2025. Current Opinion in Biotechnology. (93) 103310
W Gasparrini, SH Lee, BM Woolston
13. Metabolic engineering of E. coli for enhanced diols production from acetate
2025. ACS Synthetic Biology. 14 (4) 1204–1219
L Ricci, X Cen, Y Zu, G Antonicelli, Z Chen, D Fino, F Pirri, G Stephanopoulos, BM Woolston*, A Re*.
12. Development of a recombineering system for the acetogen Eubacterium limosum with Cas9 counterselection for markerless genome engineering
2024. ACS Synthetic Biology. 13 (8) 2505-2514
PA Sanford, BM Woolston
Preprint on bioRxiv
11. An efficient Cre-based workflow for genomic integration and expression of large biosynthetic pathways in Eubacterium limosum
2024. Biotechnology and Bioengineering, 1–7
PA Sanford, I Blaby, Y Yoshikuni, BM Woolston
10. Prevotella are major contributors of sialidases in the human vaginal microbiome
2024. Proceedings of the National Acadamies of Science, 121 (36) e2400341121
P Pelayo, F Hussain, C Werlang, C Wu, BM Woolston, CM Xiang, L Rutt, MT France, J Ravel, K Ribbeck, DS Kwon, EP Balskus
9. Controlling pericellular oxygen tension in cell culture reveals distinct breast cancer responses to low oxygen tensions.
2024. Advanced Science, 2402557
ZJ Rogers, T Colombani, S Khan, K Bhatt, A Nkovic, G Zhou, BM Woolston, CT Taylor, DM Gilkes, N Slavov, SA Bencherif
8. Engineered bacteria titrate hydrogen sulfide and induce concentration-dependent effects on the host
2023. Cell Reports 42 (12)
JA Hayes, AW Lunger, AS Sharma, MT Fernez, RL Carrier, AN Koppes , R Koppes, BM Woolston
Preprint on bioRxiv
Highlight in Trends in Biotechnology
7. Bacterial amylases enable glycogen degradation by the vaginal microbiome
2023. Nature Microbiology 8 (9) 1641-1652
DJ Jenkins*, BM Woolston*, MI Hood-Pishchany, P Pelayo, AN Konopaski, MQ Peters, MT France, J Ravel, CM Mitchell, S Rakoff-Nahoum, C Whidbey, EP Balskus
* denotes equal authorship
6. Native Gastrointestinal Mucus: Models and Techniques for Studying Interactions with Drugs, Drug Carriers, and Bacteria
2023. Advanced Drug Delivery Reviews 114966
CM Wang, MT Fernez, BM Woolston, RL Carrier
5. Deletion of biofilm synthesis in Eubacterium limosum ATCC 8486 improves handling and transformation efficiency
2023. FEMS Microbiology Letters 370
PA Sanford, KG Miller, KO Hoyt, BM Woolston
4. Expanding the genetic engineering toolbox for the metabolically flexible acetogen Eubacterium limosum
2022. Journal of Industrial Microbiology and Biotechnology 49 (5)
PA Sanford, BM Woolston
3. Adapting isotopic tracer and metabolic flux analysis approaches to study C1 metabolism
2022. Current Opinion in Biotechnology 75, 1052695
KO Hoyt, BM Woolston
2. Synthetic or Natural? Metabolic engineering for assimilation and valorization of methanol
2022. Current Opinion in Biotechnology 74, 171-179
PA Sanford, BM Woolston
1. Cysteine dependence of Lactobacillus iners is a potential therapeutic target for vaginal microbiota modulation
2022. Nature Microbiology 7 (3) 434-450
SM Bloom, NA Mafunda, BM Woolston, MR Hayward, JF Frempong, AB Abai, J Xu, AJ Mitchell, X Westergaard, FA Hussain, N Xulu, M Dong, KL Dong, T Gumbi, FX Ceasar, JK Rice, N Choksi, N Ismail, T Ndung'u, MS Ghebremichael, DA Relman, EP Balskus, CM Mitchell, DS Kwon
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